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Get flatpak to build again

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Merged Jordan Petridis requested to merge alatiera/fix-flatpak into master Sep 27, 2018
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Nightly has been failing for a while. 2 modules dropped autotools support, and openssl 1.0 was dropped from the Freedesktop runtime.

Edited Sep 27, 2018 by Jordan Petridis
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Source branch: alatiera/fix-flatpak