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CI: try to make the flatpak tests run again

Christoph Reiter requested to merge creiter/pygobject:ci-flatpak-test into master

Half a year ago they broke due to some changes of either the gnome-runtime-images docker images, or the contained flatpak, or something else: gnome-runtime-images#7

This creates a fake dbus system bus so flatpak run doesn't fail.

After this it turned out that pip install is now completely broken in the sdk and it installs packages to a place where it can't find them afterwards, so just use a venv instead.

Finally the pygobject test suite still crashes at some point, but at least it's better then before.

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