crash in Terminal: Running Bioconductor und...
Submitted by lco..@..na.edu
Link to original bug (#493605)
Description
Version: 2.18.1
What were you doing when the application crashed? Running Bioconductor under R-Cran
performed command "biocLite()" to update Bioconductor packages. It was during the package(s) installation process that the terminal crashed.
Distribution: Debian lenny/sid Gnome Release: 2.18.3 2007-07-03 (Debian) BugBuddy Version: 2.18.1
System: Linux 2.6.22-2-686 #1
SMP Fri Aug 31 00:24:01 UTC 2007 i686
X Vendor: The X.Org Foundation
X Vendor Release: 10300000
Selinux: No
Accessibility: Disabled
GTK+ Theme: Clearlooks
Icon Theme: gnome
Memory status: size: 39440384 vsize: 39440384 resident: 18722816 share: 10145792 rss: 18722816 rss_rlim: 4294967295 CPU usage: start_time: 1193970119 rtime: 3151 utime: 2798 stime: 353 cutime:3626 cstime: 252 timeout: 0 it_real_value: 0 frequency: 100
Backtrace was generated from '/usr/bin/gnome-terminal'
(no debugging symbols found) Using host libthread_db library "/lib/i686/cmov/libthread_db.so.1". (no debugging symbols found) [Thread debugging using libthread_db enabled] [New Thread 0xb6ecb6b0 (LWP 681)] [New Thread 0xb68ffb90 (LWP 689)] (no debugging symbols found) 0xffffe410 in __kernel_vsyscall ()
`#0` 0xffffe410 in __kernel_vsyscall ()
`#1` 0xb784514b in waitpid () from /lib/i686/cmov/libpthread.so.0
`#2` 0xb7ef3865 in ?? () from /usr/lib/libgnomeui-2.so.0
`#3` 0x000003e8 in ?? ()
`#4` 0xbfcce798 in ?? ()
`#5` 0x00000000 in ?? ()
Thread 2 (Thread 0xb68ffb90 (LWP 689)):
`#0` 0xffffe410 in __kernel_vsyscall ()
No symbol table info available.
`#1` 0xb78441fb in read () from /lib/i686/cmov/libpthread.so.0
No symbol table info available.
`#2` 0xb774e0af in ?? () from /usr/lib/libglib-2.0.so.0
No symbol table info available.
`#3` 0x00000014 in ?? ()
No symbol table info available.
`#4` 0xb68ff388 in ?? ()
No symbol table info available.
`#5` 0x00000014 in ?? ()
No symbol table info available.
`#6` 0xb784230a in pthread_setspecific () from /lib/i686/cmov/libpthread.so.0
No symbol table info available.
`#7` 0xb77704bf in ?? () from /usr/lib/libglib-2.0.so.0
No symbol table info available.
`#8` 0x00000000 in ?? ()
No symbol table info available.
Thread 1 (Thread 0xb6ecb6b0 (LWP 681)):
`#0` 0xffffe410 in __kernel_vsyscall ()
No symbol table info available.
`#1` 0xb784514b in waitpid () from /lib/i686/cmov/libpthread.so.0
No symbol table info available.
`#2` 0xb7ef3865 in ?? () from /usr/lib/libgnomeui-2.so.0
No symbol table info available.
`#3` 0x000003e8 in ?? ()
No symbol table info available.
`#4` 0xbfcce798 in ?? ()
No symbol table info available.
`#5` 0x00000000 in ?? ()
No symbol table info available.
`#0` 0xffffe410 in __kernel_vsyscall ()
The program is running. Quit anyway (and detach it)? (y or n) [answered Y; input not from terminal]
----------- .xsession-errors (46745 sec old) --------------------- ** Message: volume = 0 ** Message: drive = 0 ** Message: volume = 0 ** Message: drive = 0 ** Message: volume = 0 ** Message: drive = 0 ** Message: volume = 0 ** Message: drive = 0 ** Message: volume = 0 ** Message: drive = 0 ** Message: volume = 0 ** Message: drive = 0 ** Message: volume = 0 ...Too much output, ignoring rest...
Version: 2.18.x
Resolution: RESOLVED INCOMPLETE