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flatpak: Operate on a copy of the FlatpakInstallation

This means that global state changes, such as to the no-interaction flag of the FlatpakInstallation, don’t escape outside the context of the transaction currently being run.

This is a follow up to !283 (merged), using a suggestion by Matthias Clasen.

Signed-off-by: Philip Withnall withnall@endlessm.com

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